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http://purl.org/dc/elements/1.1/identifier
https://identifiers.org/wikipathways/WP4016
http://purl.org/dc/elements/1.1/source
http://purl.org/dc/elements/1.1/title
DNA IR-damage and cellular response via ATR
http://purl.org/dc/terms/description
In fission yeast, the rad3 gene product plays a critical role in sensing DNA structure defects and activating damage response pathways. A structural homologue of rad3 in humans has been identified based on sequence similarity in the protein kinase domain. ATR (for Ataxia Telangiectasia and Rad3-related) is considered the mammalian counterpart of yeast rad3, Mec1p, and fruit fly Mei-41, proteins involved in DNA damage responses.
The ATR protein is a member of the phosphoinositide 3-kinase related kinase family and plays an important role in UV-induced DNA damage checkpoint response and its role as a signal transducer in cell cycle checkpoint has been well established. Even though it is currently unclear whether ATR functions as a damage sensor, recent evidence shows that ATR may function as an initial sensor in the DNA damage checkpoint response. Moreover, it has been found that ATR is a DNA-binding protein with higher affinity to UV-damaged than undamaged DNA. In addition, damaged DNA stimulates the kinase activity of ATR to a significantly higher level than undamaged DNA.
ATR is structurally related to ATM (for Ataxia Telangiectasia Mutated) as well as the yeast PIK family members Mec1p and Rad3. Mec1p and Rad3 participate in checkpoint pathways induced by DNA replication blocks, DNA strand breaks, and other chromosomal abnormalities, which implies that ATR performs similar functions in mammalian cells. Reports have demonstrated that overexpression of a catalytically inactive version of ATR (ATRki) in human fibroblasts caused hypersensitivity to gamma-radiation and hydroxyurea and abrogation of the radiation-induced G2 checkpoint. The checkpoint defects observed in ATR-overexpressing cells resemble those found in AT cells.
Additionally, ATR functions as an upstream regulator of p53 phosphorylation in DNA-damaged cells. ATR phosphorylates p53 at both Ser-15 and Ser-37 in vitro, suggesting that ATR is directly involved in the modification of p53 in DNA-damaged cells. Recent reports concerning ATM, suggest that ATR and ATM play both overlapping and independent roles in the phosphorylation of p53 during cellular exposure to genotoxic stress.
Atr is localized to the nuclei of primary spermatocytes, cells that are undergoing meiosis I. It has been demonstrated that both Atr and Atm proteins have associated protein kinase activity, consistent with their primary structures. Additionally, Atr and Atm show specific association with chromosomes in cells that are in early meiosis I as demonstrated by antibody localization on surface-spread spermatocytes. Both the Atr and Atm proteins are present at pairing forks in meiotic prophase as chromosomes synapse; however, they do not colocalize, instead they occupy complementary positions: Atr localizes along unsynapsed chromosome axes and Atm interacts with synapsed axes.
Meanwhile ATM is activated by damage-induced rapid intermolecular autophosphorylation prior relocalization to sites of DNA breaks, ATR activation seems to require single-stranded DNA (ssDNA) coated with replication protein A. The recruitment of ATR to damage sites appears to be mediated by an ATR-interacting protein that forms a stable complex with the vast majority of ATR in human cells.
http://purl.org/dc/terms/identifier
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http://rdf.wikipathways.org/Pathway/WP4016_r120667/ComplexBinding/eb58a
http://rdf.wikipathways.org/Pathway/WP4016_r120667/ComplexBinding/f746d
https://identifiers.org/ensembl/ENSG00000149311
https://identifiers.org/pubmed/10859164
https://identifiers.org/pubmed/12791985
https://identifiers.org/pubmed/9925639
https://identifiers.org/reactome/R-HSA-5693571
https://identifiers.org/uniprot/O14757
https://identifiers.org/uniprot/O15360
https://identifiers.org/uniprot/O60671
https://identifiers.org/uniprot/O60921
https://identifiers.org/uniprot/O60934
https://identifiers.org/uniprot/O75943
https://identifiers.org/uniprot/O94782
https://identifiers.org/uniprot/O95714
https://identifiers.org/uniprot/O96017
https://identifiers.org/uniprot/P04637
https://identifiers.org/uniprot/P06493
https://identifiers.org/uniprot/P08047
https://identifiers.org/uniprot/P12004
https://identifiers.org/uniprot/P15927
https://identifiers.org/uniprot/P16104
https://identifiers.org/uniprot/P24941
https://identifiers.org/uniprot/P27694
https://identifiers.org/uniprot/P38398
https://identifiers.org/uniprot/P43351
https://identifiers.org/uniprot/P46736
https://identifiers.org/uniprot/P49959
https://identifiers.org/uniprot/P51587
https://identifiers.org/uniprot/P61077
https://identifiers.org/uniprot/Q00987
https://identifiers.org/uniprot/Q06609
https://identifiers.org/uniprot/Q12888
https://identifiers.org/uniprot/Q13472
https://identifiers.org/uniprot/Q13535
https://identifiers.org/uniprot/Q14191
https://identifiers.org/uniprot/Q14676
https://identifiers.org/uniprot/Q14683
https://identifiers.org/uniprot/Q6PJP8
https://identifiers.org/uniprot/Q6UWZ7
https://identifiers.org/uniprot/Q7Z5Q5
https://identifiers.org/uniprot/Q86YC2
https://identifiers.org/uniprot/Q8WXE1
https://identifiers.org/uniprot/Q92547
https://identifiers.org/uniprot/Q92878
https://identifiers.org/uniprot/Q96RL1
https://identifiers.org/uniprot/Q99638
https://identifiers.org/uniprot/Q99708
https://identifiers.org/uniprot/Q99728
https://identifiers.org/uniprot/Q9BX63
https://identifiers.org/uniprot/Q9BXW9
https://identifiers.org/uniprot/Q9H9A7
https://identifiers.org/uniprot/Q9HAW4
https://identifiers.org/uniprot/Q9NVI1
https://identifiers.org/uniprot/Q9UQ84
https://identifiers.org/uniprot/Q9Y6K9
https://identifiers.org/uniprot/Q9NUW8
https://identifiers.org/uniprot/Q9UPV0
https://identifiers.org/uniprot/O75419
https://identifiers.org/uniprot/P13010
https://identifiers.org/uniprot/P30307
https://identifiers.org/uniprot/P40692
https://identifiers.org/uniprot/P49736
https://identifiers.org/uniprot/Q92900
https://identifiers.org/uniprot/P06746
https://identifiers.org/uniprot/P09874
https://identifiers.org/uniprot/P53350
https://identifiers.org/uniprot/P60896
https://identifiers.org/uniprot/Q01094
https://identifiers.org/uniprot/Q13263
https://identifiers.org/uniprot/Q08050
https://identifiers.org/uniprot/Q9NZC9
https://identifiers.org/uniprot/O15297
https://identifiers.org/uniprot/P41182
https://identifiers.org/kegg.pathway/hsa04110
https://identifiers.org/pubmed/11418864
https://identifiers.org/reactome/R-HSA-69481
https://identifiers.org/uniprot/Q8NEM0