SPARQL | HTML5 RDFa and Microdata document
https://identifiers.org/hgnc.symbol/APTX
https://identifiers.org/ensembl/ENSG00000005156
https://identifiers.org/ensembl/ENSG00000039650
https://identifiers.org/ensembl/ENSG00000062822
https://identifiers.org/ensembl/ENSG00000065057
https://identifiers.org/ensembl/ENSG00000070501
https://identifiers.org/ensembl/ENSG00000073050
https://identifiers.org/ensembl/ENSG00000076248
https://identifiers.org/ensembl/ENSG00000077514
https://identifiers.org/ensembl/ENSG00000100479
https://identifiers.org/ensembl/ENSG00000100823
https://identifiers.org/ensembl/ENSG00000103152
https://identifiers.org/ensembl/ENSG00000105486
https://identifiers.org/ensembl/ENSG00000106628
https://identifiers.org/ensembl/ENSG00000109674
https://identifiers.org/ensembl/ENSG00000114026
https://identifiers.org/ensembl/ENSG00000115350
https://identifiers.org/ensembl/ENSG00000123415
https://identifiers.org/ensembl/ENSG00000129071
https://identifiers.org/ensembl/ENSG00000129484
https://identifiers.org/ensembl/ENSG00000132646
https://identifiers.org/ensembl/ENSG00000132781
https://identifiers.org/ensembl/ENSG00000139372
https://identifiers.org/ensembl/ENSG00000143799
https://identifiers.org/ensembl/ENSG00000148229
https://identifiers.org/ensembl/ENSG00000154328
https://identifiers.org/ensembl/ENSG00000166169
https://identifiers.org/ensembl/ENSG00000168496
https://identifiers.org/ensembl/ENSG00000175482
https://identifiers.org/ensembl/ENSG00000177084
https://identifiers.org/ensembl/ENSG00000189403
https://identifiers.org/hgnc.symbol/LIG1
https://identifiers.org/hgnc.symbol/RFC1
https://identifiers.org/hgnc.symbol/RFC2
https://identifiers.org/hgnc.symbol/RFC3
https://identifiers.org/hgnc.symbol/RFC4
https://identifiers.org/hgnc.symbol/RFC5
https://identifiers.org/wikipathways/WP4752
https://identifiers.org/hgnc.symbol/PARP4
https://identifiers.org/ncbigene/55775
https://identifiers.org/hgnc.symbol/POLG
http://rdf.wikipathways.org/Pathway/WP4752_r142462/Complex/c1b15
http://rdf.wikipathways.org/Pathway/WP4752_r142462/Complex/c2c25
http://rdf.wikipathways.org/Pathway/WP4752_r142462/Complex/c672c
http://rdf.wikipathways.org/Pathway/WP4752_r142462/ComplexBinding/c1b15
http://rdf.wikipathways.org/Pathway/WP4752_r142462/ComplexBinding/c2c25
http://rdf.wikipathways.org/Pathway/WP4752_r142462/ComplexBinding/c672c
https://identifiers.org/hgnc.symbol/ADPRS
https://identifiers.org/hgnc.symbol/PARPG
https://identifiers.org/hgnc.symbol/POLG2
https://identifiers.org/ncbigene/79661
https://identifiers.org/pubmed/11436317
https://identifiers.org/pubmed/17337257
https://identifiers.org/pubmed/17893748
https://identifiers.org/pubmed/21665970
https://identifiers.org/wikipathways/WP4752_r142462
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://vocabularies.wikipathways.org/wp#Pathway
http://www.w3.org/2004/02/skos/core#Collection
http://vocabularies.wikipathways.org/wp#isAbout
http://rdf.wikipathways.org/Pathway/WP4752_r142462
http://vocabularies.wikipathways.org/wp#ontologyTag
http://vocabularies.wikipathways.org/wp#Curation:ONTOX
http://vocabularies.wikipathways.org/wp#Curation:AnalysisCollection
http://purl.obolibrary.org/obo/PW_0000099
http://purl.obolibrary.org/obo/PW_0000129
http://vocabularies.wikipathways.org/wp#Curation:PancCanNet
http://vocabularies.wikipathways.org/wp#Curation:CPTAC
http://vocabularies.wikipathways.org/wp#organism
http://purl.obolibrary.org/obo/NCBITaxon_9606
http://vocabularies.wikipathways.org/wp#organismName
http://vocabularies.wikipathways.org/wp#pathwayOntologyTag
http://purl.obolibrary.org/obo/PW_0000099
http://purl.obolibrary.org/obo/PW_0000129
http://xmlns.com/foaf/0.1/img
https://www.wikipathways.org//wpi/wpi.php?action=downloadFile&type=svg&pwTitle=Pathway:WP4752&oldid=142462
https://www.wikipathways.org//wpi/wpi.php?action=downloadFile&type=png&pwTitle=Pathway:WP4752&oldid=142462
http://xmlns.com/foaf/0.1/page
http://www.wikipathways.org/instance/WP4752_r142462
http://purl.org/dc/elements/1.1/identifier
https://identifiers.org/wikipathways/WP4752
http://purl.org/dc/elements/1.1/source
http://purl.org/dc/elements/1.1/title
http://purl.org/dc/terms/description
Base excision repair is a cellular mechanism that repairs damaged DNA throughout the cell cycle. It is primarily responsible for removing small, non-helix-distorting base lesions from the genome.
Base excision repair is important for removing damaged bases that could otherwise cause mutations by mispairing, or could lead to breaks in DNA during replication.
BER is initiated by DNA glycosylases, which recognize and remove specific damaged or inappropriate bases, forming AP sites. These are then cleaved by an AP endonuclease. The resulting single-strand break can then be processed by either short-patch (where a single nucleotide is replaced) or long-patch BER (where 2-10 new nucleotides are synthesized). The choice between short- and long-patch repair is currently under investigation. Various factors are thought to influence this decision, including the type of lesion, the cell cycle stage, and whether the cell is terminally differentiated or actively dividing. Some lesions, such as oxidized or reduced AP sites, are resistant to pol β lyase activity and therefore must be processed by long-patch BER.
This pathway is based on information from REPAIRtoire (http://repairtoire.genesilico.pl/Pathway/4/), Wikipedia (https://en.wikipedia.org/wiki/Base_excision_repair) and KEGG (https://www.genome.jp/dbget-bin/www_bget?map03410). The description was adapted from REPAIRtoire, layout is based on KEGG.
http://purl.org/dc/terms/identifier
http://purl.org/dc/terms/references
https://identifiers.org/pubmed/21665970
https://identifiers.org/pubmed/11436317
https://identifiers.org/pubmed/17337257
https://identifiers.org/pubmed/17893748
http://purl.org/spar/cito/cites
https://identifiers.org/pubmed/11436317
https://identifiers.org/pubmed/17337257
https://identifiers.org/pubmed/17893748
https://identifiers.org/pubmed/21665970
https://identifiers.org/hgnc.symbol/PARP3