SPARQL | HTML5 RDFa and Microdata document
https://identifiers.org/chebi/CHEBI:29805
https://identifiers.org/chebi/CHEBI:57972
https://identifiers.org/uniprot/P30038
https://identifiers.org/chebi/CHEBI:33384
https://identifiers.org/uniprot/P14920
https://identifiers.org/uniprot/P21549
https://identifiers.org/chebi/CHEBI:15361
https://identifiers.org/chebi/CHEBI:16238
https://identifiers.org/chebi/CHEBI:29108
https://identifiers.org/uniprot/P00338
https://identifiers.org/uniprot/P00505
https://identifiers.org/chebi/CHEBI:36655
https://identifiers.org/chebi/CHEBI:57305
https://identifiers.org/chebi/CHEBI:16659
https://identifiers.org/chebi/CHEBI:17180
https://identifiers.org/chebi/CHEBI:17742
https://identifiers.org/chebi/CHEBI:18095
https://identifiers.org/chebi/CHEBI:30623
https://identifiers.org/chebi/CHEBI:62612
https://identifiers.org/chebi/CHEBI:6331
https://identifiers.org/reactome/R-HSA-6784213
https://identifiers.org/reactome/R-HSA-6784434
https://identifiers.org/reactome/R-HSA-6784436
https://identifiers.org/uniprot/Q86XE5
https://identifiers.org/uniprot/Q9H2B4
https://identifiers.org/uniprot/Q9NR77
https://identifiers.org/uniprot/Q9UBQ7
https://identifiers.org/uniprot/Q9UF12
https://identifiers.org/uniprot/Q9UJM8
https://identifiers.org/wikidata/Q27102017
https://identifiers.org/wikipathways/WP4361
https://identifiers.org/wikipathways/WP5166
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/a23d9
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/abbd6
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/b11c6
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/b8577
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/c876f
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/cdf7c
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/cfdb2
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/ec65e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/Complex/faa0e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/a23d9
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/abbd6
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/b11c6
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/b8577
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/c876f
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/cdf7c
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/cfdb2
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/ec65e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/ComplexBinding/faa0e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/a93bc
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/aa375
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/aa860
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/ae961
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/af38a
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/af5c9
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/afed3
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/b6598
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/bfda5
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/c03a1
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/c1706
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/c41d2
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/c5ff4
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/c7960
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/cf7ee
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/d5c6e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/d7a19
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/df5fe
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e2679
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e4985
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e6c1e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e6f0f
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e7e32
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e8690
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e8e75
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e9259
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/e98a7
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/ea0ce
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/ec30e
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/eefc5
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/f15a7
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/f8eb1
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/fbc58
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/fbc9b
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/fd795
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/id44a6ec9
http://rdf.wikipathways.org/Pathway/WP5166_r136362/WP/Interaction/idd68e4f6b
https://identifiers.org/wikipathways/WP5166_r136362
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.w3.org/2004/02/skos/core#Collection
http://vocabularies.wikipathways.org/wp#Pathway
http://vocabularies.wikipathways.org/wp#cellTypeOntologyTag
http://purl.obolibrary.org/obo/CL_0000003
http://purl.obolibrary.org/obo/CL_0000182
http://vocabularies.wikipathways.org/wp#diseaseOntologyTag
http://purl.obolibrary.org/obo/DOID_655
http://purl.obolibrary.org/obo/DOID_0111670
http://purl.obolibrary.org/obo/DOID_0111671
http://purl.obolibrary.org/obo/DOID_0111672
http://purl.obolibrary.org/obo/DOID_2977
http://vocabularies.wikipathways.org/wp#isAbout
http://rdf.wikipathways.org/Pathway/WP5166_r136362
http://vocabularies.wikipathways.org/wp#ontologyTag
http://purl.obolibrary.org/obo/DOID_655
http://vocabularies.wikipathways.org/wp#Curation:AnalysisCollection
http://purl.obolibrary.org/obo/PW_0001780
http://purl.obolibrary.org/obo/PW_0001781
http://purl.obolibrary.org/obo/PW_0001782
http://purl.obolibrary.org/obo/PW_0000013
http://purl.obolibrary.org/obo/PW_0001783
http://purl.obolibrary.org/obo/CL_0000182
http://vocabularies.wikipathways.org/wp#Curation:ONTOX
http://purl.obolibrary.org/obo/DOID_0111670
http://purl.obolibrary.org/obo/DOID_0111671
http://purl.obolibrary.org/obo/DOID_0111672
http://purl.obolibrary.org/obo/CL_0000003
http://purl.obolibrary.org/obo/DOID_2977
http://purl.obolibrary.org/obo/PW_0000083
http://purl.obolibrary.org/obo/PW_0000440
http://vocabularies.wikipathways.org/wp#Curation:IEM
http://vocabularies.wikipathways.org/wp#Curation:RareDiseases
http://vocabularies.wikipathways.org/wp#organism
http://purl.obolibrary.org/obo/NCBITaxon_9606
http://vocabularies.wikipathways.org/wp#organismName
http://vocabularies.wikipathways.org/wp#pathwayOntologyTag
http://purl.obolibrary.org/obo/PW_0001780
http://purl.obolibrary.org/obo/PW_0001781
http://purl.obolibrary.org/obo/PW_0001782
http://purl.obolibrary.org/obo/PW_0001783
http://purl.obolibrary.org/obo/PW_0000013
http://purl.obolibrary.org/obo/PW_0000083
http://purl.obolibrary.org/obo/PW_0000440
http://xmlns.com/foaf/0.1/img
https://www.wikipathways.org//wpi/wpi.php?action=downloadFile&type=png&pwTitle=Pathway:WP5166&oldid=136362
https://www.wikipathways.org//wpi/wpi.php?action=downloadFile&type=svg&pwTitle=Pathway:WP5166&oldid=136362
http://xmlns.com/foaf/0.1/page
http://www.wikipathways.org/instance/WP5166_r136362
http://purl.org/dc/elements/1.1/identifier
https://identifiers.org/wikipathways/WP5166
http://purl.org/dc/elements/1.1/source
http://purl.org/dc/elements/1.1/title
http://purl.org/dc/terms/description
The glyoxylate metabolism in hepatocytes is affected by primary hyperoxaluria (PH) types 1-3, leading to glyoxylate accumulation and hence, increased oxalate production, which is transported out of the hepatocytes by SLC26a1 transporters on the basolateral membrane into the blood and consequently, the kidneys, where it causes the occurrence of CaOx (calcium + oxalate) crystal deposition and hence, kidney stones. PH1 is caused due to a mutation of the AGT (glyoxylate aminotransferase) trimer, responsible for the conversion of glyoxylate into pyruvate in the peroxisome. PH2 is caused by mutations of glyoxylate reductase (GR), that converts 3-hydroxypyruvate into D-glycerate in the cytosol. It also catalyses the conversion of glyoxylate into glycolate. PH3 is linked to mutations on the HOGA1 gene, yielding the tetramer 4‐hydroxy‐2‐oxoglutarate aldolase, which acts in the mitochondrion to convert 4-hydroxy-2-oxoglutarate to glyoxylate.
Secondary hyperoxaluria is caused by (1) increased absorption of dietary oxalate through the GI tract or (2) increased consumption of dietary oxalate.
There is an abundance of knowledge gaps in this pathway, specifically regarding the peroxisomal and mitochondrial transporters for several metabolites.
This pathway is based on Physicians Guide to the Diagnosis, Treatment, and Follow-up of Inherited Metabolic Diseases by Nenad Blau Chapter 28 (Hyperoxalurias) (ISBN 3642403360).
http://purl.org/dc/terms/identifier
http://purl.org/spar/cito/cites
https://identifiers.org/pubmed/8915003
https://identifiers.org/pubmed/28271480
https://identifiers.org/pubmed/26655602
https://identifiers.org/pubmed/26858947
https://identifiers.org/pubmed/30405874
https://identifiers.org/pubmed/31107247
https://identifiers.org/pubmed/31696211
https://identifiers.org/pubmed/29914758
https://identifiers.org/pubmed/33917320
https://identifiers.org/pubmed/19352492